A friend of mine has a 2007 FXSTC Custom, bike rode fine for about 2400 miles, after that he was experiencing a wobble. He had it in to HD, they said there was no problem. He adjusted the neck bearing tension, was better for a while, but wobble came back. He put the bike back in the lift and the neck was not tight, the flop test was off again! He readjusted it again and the same thing happened. He then pulled the front end off and checked the bearings, then didn't look bad, then looked at the races, there was a slight mark on one so he pulled it. The neck under the race was burred and not smooth. Our thoughts was that the burrs kept the race from seating properly in the neck, as he adjusted the front end it pushed the race farther in, and slightly cocked. Anyway he replaced the neck bearings and races. At the same time he was getting a new front tire, when he took the bearings out of the front wheel he noticed that they didn't turn freely, there was slight resistance in some spots, so they were changed also. He has had no wobble since. So we don't know if it was one or the other, or both causing his wobble.
Craig