If there were no timing changes you should be having a very candid converstation with the dealership. These bikes come extremely lean and very detuned. I would take the stock map and print out the timing tables on both cylinders then print out the map the dealer made for you and use 2 highlighters one yellow for front one orange for rear and and block out to show where any timing changes were made. If all they did was add fuel I would ask the dealership for the stepped run print out to show they did anything other than put the newer map in place and maybe tweak the fuel a tiny bit. What number is your final run printed out like run 8 run 15?
Looking at this lets say you did stepped runs both cylinders from 2 percent to say 20 percent that 2,5,7,10,15,20 that is 12 runs then you have sweeps from say 30 percent to 100 percent lets just say you did 4 or 5 of those on the bike each cylinder that is another 10 that is 22 runs then you have fine tuning on the bike and some runs to get rid of decel pop if there is any. I would guess you would be anywhere from 22 --> up in runs from your dyno tune if it were a full dyno tune using a race tuner. There is a reason that the SERT takes 4+ hours to tune, most take a lot longer.