I change gaskets each time I re-install pipe, very cheap do, get the Screamin Eagle gaskets
Hold the pipe in place, slide flange over bolts. I use red locktite. put the nut on that it the hardest to reach first and run it up to hand tight, you can use socket and extension to do this but don't ratchet yet.thread other nut on and tighten to about 20 in lbs. Now before you tighten these all down, make sure all your secondary support brackets line up. start those nuts/bolts. Now go back and tighten head pipe to cylinder heads to 110-120"lbs. not FT lbs. do not over torque this. If you break it, it's a biotch. ask me how I know this, on second thought, don't.
what I now do is torque it to 110"lbs, get all else together and start it, check for leaks, bring it up to temp then shut dont. tighten to 120"lbs, the expansion from heat allows a good seat.