all dips are not created equal.
some exhaust have dips. take a d&d fatcat (touring model) for instance,they will dip somewhat at 3000-3300 rpms. but the dip might still might be better (more hp/tq) than say a 2-2 exhaust in that same rpm.
and yes some combos.motor,exhaust, cams etc will have trouble spooling the heavy drum at low rpms on a WOT run in high gear 1:1 ratio.
then there is clutch slip, most all modified motors will show some slip down low,even with clutch upgrades. this will be reflected on the wot dyno sheet.
then there is tuning dips. fuel,timing. so it is part of what you pay for when you get a dyno tune.
we look at the whole picture and determine what is going on.
that said...what you see on a dyno sheet is WOT in high gear (most tuners) 1:1 ratio. so 5th gear on a 5 sp and 6 th gear on a 6 speed.
so just because you see a dip @ 2500 WOT in high gear,dosent mean it dips there in a lower gear,or that you are down on hp/tq @ 2500 rpm when cruising @ part throttle.
how many times do you wack the throttle to WOT @ 2200 rpms in high gear on the street? I know some do

but why?
FWIW you will never feel (SOP) a 3-5 hp/tq WOT dip @2200-2500rpms. when you are running through the gears.
and if you are cruising there,you are only making 15-20 hp anyway. (whatever it take to maintain your speed)