Sorry to hear you installed a Jim's 131 and I'm not surprised you are having problems at 500 mile..
I am very happy with the reliability and performance of my 131. I’ve been running a Jims 131 with a 58mm TB, in a 2009 FLHX for 3 years. I swapped the original engine out for the 131 at 255 miles. The machine now has 39,641 miles.
This engine delivers around 40 mpg on the slab, and last July 3 on a 55 mph two-lane, with the wind at my back, I saw 48 mpg on a 170 mile leg; although that was the first time that I've seen anything like that!
I replaced the original (noisy) lifters in the Jims engine with OE lifters at 550 miles on the odometer (295 on the lifters), then as a precaution, every 10 to 13 thousand miles thereafter. Other than regular scheduled maintenance, lifters and tires, the only issue with the powertrain and chassis was a weeping rear rocker box, at 19,991 miles.
After this year the plan is to slip the 131 into a new machine and run it for another season.