I just had my dealer replace both rotors on my 2008 SERK under the extended warrantee, it cost me $50 deductible. I had to "persuade" them to call into the insurer as they first tried to convince me that this was a normal wear item. I was really helped by all the info on this forum and used that to convince them that I know this is a common problem with this bike and if he wasn't going to go after the insurer, then I would need to talk to the owner of the dealership and then direct to HD. The right disk was out .0075 and the left one was .009, of course, they said that .008 was within tolorance. I asked them to ride the bike and tell me that it was safe to continue to ride. They didn't take me up on that. While they had it apart I had them replace the disks as well, which I paid for since I do consider them a wear item (the bike only has 4500 miles on it so they were not worn much!!), but I wanted to start with a fresh set since I think the wobbly disk probably wore them unevenly. I also had had the front tire replaced since it had cupped and I also had the noise or howling when turning due to the cupping. The tire also had a rather long cut in the sidewall which was enough for me to get it replaced. Unfortunately I didn't have the tire and wheel warrenty so this was on my dime. After all this was done, the bike is now great again. Very smooth breaking and no howling by the new tire. You need to keep after them at the dealership or try another dealership, it can be done under warrenty.
Walt