TwoLaneRider,
Just a suggestion here. It's a difficult one, but I know it can be done. If I'm way out of line, tell me to go have a cup of "Shut the Heck up", and I will. When I was having my ORIGINAL Marelli issues (which were very similar to yours in that regardless of what I did, the bike ran like crap) over a year ago, I made a "telephone appointment" with Dan Fitz. It took me two whole days of clearing my calendar and waiting by the phone for him to call, but eventually I finally did get to speak to him.
Anyway, make this appointment with the sole purpose of having him walk you through everything live time. Set your phone up with a hands free set, and have the bike cold and hooked up to the PC. If you have another PC, log onto the internet in case he needs to e-mail you a new adjusted MAP. This way he can tell you how to adjust the flux-capacitor, change the di-lithium crystals, and reverse polarize the whatchamacallit, and do it all direct and live. That's what we did. The bad news is after all that he never did get the bike to run decent, and I had to leave it with a tuner who understood the T-Max software. But that saga is for another day
Anyway, give that idea a thought. And if you can't get Danny Fitz on the phone, maybe Rhino might be able to give you live phone tech support. I hope my suggestions don't cause problems on the board or piss more people off. I'm not trying to stick my nose in other peoples lives and business, I'm just trying to help TwoLane get his issue resolved.
Anyway, like I said, if you want me to pull this post and delete it, let me know and I will.
Mark