First, welcome to the site and we're glad you've joined us.
Second, I have the same bike you do, and it's as smooth as any Harley I've owned, possibly smoother.
Was it like that when you test drove it? I'd get the dealer to drive it, sit on it, whatever it takes, and I'd keep pestering them until you get satisfaction. I'd look at every nut and bolt on the engine all the way up to the handlebars for loose/missing fasteners. It sounds like something's loose to me. And you're right, the vibration you're describing is not common to our bikes, from what little I know.
You're not new to Harleys, so you know a Harley does some amount of vibrating, but not to the extent you're describing. If you're not comfortable or satisfied, make a case for it.
In the meantime, someone else will weigh in on this thread that may have more information and knowlege than I do.
Good luck and I hope you get it satisfied to your liking!